Rogue Nude Mod provides several options for the Beast's clothes, the ability to choose a young version of the heroine from Johnny's flashbacks, and, of course, completely strip her.
The Misty - Nude Models and Other Clothes mod replaces Misty's classic look with a completely naked model, a topless version, and other clothing options.
For fans of Panama and Judy, Appearance Menu Mod was previously released. This voluminous modern menu allows dressing up these two heroines and customizing the rest of the models in the game. To strip all the women in the game, you need the Nude Model Retextures Mod.